HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC5AG039980
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
5A 470999019 471001426 - gene:TRIDC5AG039980
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.20 29,869.68 Da 62.34 82.03 -0.37
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18186 BTB_POZ_ZBTB_KLHL-like 199 261 3.67789E-20 -
Pfam PF00651 BTB/POZ domain 193 261 3.4E-16 IPR000210
SUPERFAMILY SSF54695 POZ domain 188 261 2.98E-18 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 174 264 2.7E-19 IPR011333
ProSiteProfiles PS50097 BTB domain profile. 200 259 15.866139 IPR000210
MobiDBLite mobidb-lite consensus disorder prediction 26 47 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G55760.1 BTB/POZ domain-containing protein. 0
RefSeq XP_037431159.1 BTB/POZ domain-containing protein At1g55760-like [Triticum dicoccoides] 0
Swiss-Prot Q680K8 BTB/POZ domain-containing protein At1g55760 OS=Arabidopsis thaliana OX=3702 GN=At1g55760 PE=2 SV=1 0
TrEMBL A0A453L2X8 BTB domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC5AG039980.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.