Basic Information
Locus ID:
gene:TRIDC5AG039680
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 468281267 | 468284669 | + | gene:TRIDC5AG039680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 115,806.14 Da | 38.93 | 104.52 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 464 | 524 | 2.3E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 3.4E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 771 | 984 | 1.5E-34 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 296 | 356 | 4.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 82 | 429 | 2.51E-65 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 388 | 688 | 3.74E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 763 | 1053 | 3.1E-58 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 533 | 610 | 1.0E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 434 | 532 | 5.8E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 847 | 1065 | 2.1E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 753 | 846 | 2.0E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 611 | 695 | 3.9E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 224 | 334 | 2.0E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 433 | 3.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 211 | 2.9E-45 | IPR032675 |
| SMART | SM00220 | serkin_6 | 768 | 1025 | 5.3E-18 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 512 | 534 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 605 | 629 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 581 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 343 | 367 | 5.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 150 | 174 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 630 | 654 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 295 | 319 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 439 | 463 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 487 | 511 | 220.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 632 | 654 | 7.650349 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 768 | 1055 | 32.767574 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 897 | 909 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 774 | 797 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 129 | 142 | 4.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 343 | 356 | 4.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1058 | 1103 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56040.2 | Leucine-rich receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037434866.1 | LRR receptor-like serine/threonine-protein kinase [Triticum dicoccoides] | 0 |
| F4K6B8 | Leucine-rich repeat receptor-like serine/threonine-protein kinase RGI4 OS=Arabidopsis thaliana OX=3702 GN=RGI4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KK26 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG039680.