Basic Information
Locus ID:
gene:TRIDC5AG039600
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 468137943 | 468142179 | + | gene:TRIDC5AG039600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 71,649.31 Da | 50.16 | 82.24 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 93 | 132 | 7.1E-10 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 296 | 391 | 1.4E-8 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 91 | 149 | 1.7E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 91 | 138 | 2.3E-9 | - |
| SMART | SM00256 | fbox_2 | 96 | 136 | 3.1E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 187 | 402 | 5.1E-27 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 90 | 137 | 10.34529 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 600 | 626 | - | - |
| Coils | Coil | Coil | 567 | 587 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_044396571.1 | uncharacterized protein LOC123120635 [Triticum aestivum] | 0 |
| Q9SFC7 | F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453L1T9 | F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG039600.