Basic Information
Locus ID:
gene:TRIDC5AG038990
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 462245721 | 462257746 | - | gene:TRIDC5AG038990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 79,256.12 Da | 41.75 | 76.64 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 276 | 315 | 3.4302E-6 | - |
| CDD | cd14066 | STKc_IRAK | 398 | 666 | 1.11424E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 393 | 661 | 8.4E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 375 | 663 | 3.78E-74 | IPR011009 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 235 | 316 | 1.73E-8 | IPR009030 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 365 | 467 | 2.2E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 468 | 686 | 1.9E-52 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 223 | 315 | 1.1E-10 | - |
| SMART | SM00181 | egf_5 | 226 | 275 | 14.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 279 | 315 | 0.16 | IPR000742 |
| SMART | SM00179 | egfca_6 | 276 | 315 | 3.4E-6 | IPR001881 |
| SMART | SM00220 | serkin_6 | 392 | 675 | 4.6E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 392 | 675 | 37.940617 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 276 | 315 | 9.960552 | IPR000742 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 292 | 303 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 398 | 420 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 512 | 524 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 276 | 301 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037431146.1 | putative wall-associated receptor kinase-like 16 [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6KKJ5 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG038990.