Basic Information
Locus ID:
gene:TRIDC5AG038800
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 460046382 | 460047964 | - | gene:TRIDC5AG038800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 41,065.87 Da | 58.05 | 74.43 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 127 | 170 | 1.07179E-18 | - |
| Pfam | PF13639 | Ring finger domain | 127 | 170 | 5.1E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 105 | 176 | 2.04E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 176 | 6.9E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 128 | 169 | 1.5E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 128 | 170 | 12.725326 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 341 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05200.1 | RING/U-box superfamily protein. Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6). | 0 |
| RefSeq | XP_037434784.1 | E3 ubiquitin-protein ligase ATL6-like [Triticum dicoccoides] | 0 |
| Q8RXX9 | E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6KKI0 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG038800.