Basic Information
Locus ID:
gene:TRIDC5AG035910
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
In Between Ring fingers
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 437251531 | 437253186 | - | gene:TRIDC5AG035910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 37,544.20 Da | 49.99 | 74.38 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01485 | IBR domain, a half RING-finger domain | 243 | 296 | 1.2E-10 | IPR002867 |
| SUPERFAMILY | SSF57850 | RING/U-box | 155 | 237 | 7.39E-16 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 307 | 344 | 1.94E-7 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 238 | 301 | 2.47E-7 | - |
| Gene3D | G3DSA:1.20.120.1750 | - | 293 | 345 | 5.1E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 153 | 242 | 1.3E-22 | IPR013083 |
| SMART | SM00647 | ibrneu5 | 228 | 296 | 3.3E-14 | IPR002867 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. | 155 | 345 | 25.822863 | IPR044066 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 159 | 204 | 10.04028 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 177 | 186 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53690.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037432665.1 | E3 ubiquitin-protein ligase RNF144A-like [Triticum dicoccoides] | 0 |
| Q4KLT0 | E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis OX=8355 GN=rnf217 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KJ03 | RBR-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG035910.