Basic Information
Locus ID:
gene:TRIDC5AG034840
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 430185069 | 430188760 | + | gene:TRIDC5AG034840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 42,906.92 Da | 54.33 | 73.65 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 305 | 347 | 1.4E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 300 | 353 | 1.49E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 268 | 353 | 7.6E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 306 | 346 | 2.7E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 306 | 347 | 12.518784 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
| Coils | Coil | Coil | 158 | 178 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20910.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037434523.1 | E3 ubiquitin-protein ligase AIP2-like [Triticum dicoccoides] | 0 |
| Q8RXD3 | E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana OX=3702 GN=AIP2 PE=1 SV=1 | 0 | |
| TrEMBL | C0KTZ5 | ABI3-interacting protein 2-1 OS=Triticum aestivum OX=4565 GN=AIP2-1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG034840.