Basic Information
Locus ID:
gene:TRIDC5AG034790
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
IBR domain, a half RING-finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 429862295 | 429864689 | + | gene:TRIDC5AG034790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 24,873.54 Da | 57.40 | 71.86 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01485 | IBR domain, a half RING-finger domain | 140 | 193 | 1.6E-8 | IPR002867 |
| SUPERFAMILY | SSF57850 | RING/U-box | 53 | 136 | 1.35E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 140 | 198 | 6.83E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 50 | 142 | 1.2E-14 | IPR013083 |
| SMART | SM00184 | ring_2 | 56 | 104 | 0.0076 | IPR001841 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. | 52 | 231 | 18.128082 | IPR044066 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 75 | 84 | - | IPR017907 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048547391.1 | E3 ubiquitin-protein ligase RSL1-like [Triticum urartu] | 0 |
| TrEMBL | A0A3B6KJD9 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG034790.