Basic Information
Locus ID:
gene:TRIDC5AG034770
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
In Between Ring fingers
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 429838481 | 429839432 | + | gene:TRIDC5AG034770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 33,337.25 Da | 62.29 | 71.08 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 252 | 297 | 7.3E-5 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 248 | 303 | 1.99E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 246 | 316 | 7.7E-15 | IPR013083 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. | 248 | 316 | 12.455099 | IPR044066 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 252 | 297 | 9.671455 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 270 | 279 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 89 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19670.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037431081.1 | uncharacterized protein LOC119297370 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6KIR0 | RBR-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG034770.