Basic Information
Locus ID:
gene:TRIDC5AG034110
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 423767057 | 423770666 | + | gene:TRIDC5AG034110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 122,829.59 Da | 41.38 | 104.89 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 875 | 1141 | 5.3E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 265 | 322 | 9.0E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 169 | 229 | 3.5E-9 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 424 | 769 | 8.24E-61 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 99 | 421 | 1.26E-64 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 851 | 1144 | 6.15E-66 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 411 | 797 | 1.5E-106 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 830 | 942 | 4.8E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 58 | 331 | 2.5E-68 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 332 | 410 | 6.1E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 943 | 1148 | 4.6E-51 | - |
| SMART | SM00369 | LRR_typ_2 | 287 | 311 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 407 | 431 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 649 | 672 | 6.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 120 | 143 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 455 | 479 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 601 | 625 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 359 | 383 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 216 | 239 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 722 | 746 | 52.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 871 | 1144 | 5.5E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 871 | 1148 | 34.930073 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 877 | 899 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 988 | 1000 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 219 | 232 | 1.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 722 | 735 | 1.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17750.1 | PEP1 receptor 2. Encodes PEPR2, a plasma membrane leucine-rich repeat receptor kinase functioning as a receptor for the Pep1 and Pep2 peptides. Pep1 and Pep2 are amino acids that induce the transcription of defense-related genes. | 0 |
| RefSeq | XP_037434473.1 | leucine-rich repeat receptor-like protein kinase PEPR2 [Triticum dicoccoides] | 0 |
| Q9FZ59 | Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana OX=3702 GN=PEPR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KG34 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG034110.