Basic Information
Locus ID:
gene:TRIDC5AG033350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
zinc finger, C3HC4 type domain containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 414373193 | 414377339 | + | gene:TRIDC5AG033350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 29,229.23 Da | 42.08 | 108.37 | 0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 198 | 239 | 3.9E-10 | - |
| Pfam | PF10269 | Transmembrane Fragile-X-F protein | 9 | 72 | 5.5E-9 | IPR019396 |
| SUPERFAMILY | SSF57850 | RING/U-box | 189 | 242 | 7.39E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 175 | 244 | 3.3E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 199 | 234 | 10.881201 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73950.1 | Transmembrane Fragile-X-F-associated protein. | 0 |
| RefSeq | XP_037434427.1 | uncharacterized protein LOC119301541 [Triticum dicoccoides] | 0 |
| Q95M71 | Baculoviral IAP repeat-containing protein 8 OS=Gorilla gorilla gorilla OX=9595 GN=BIRC8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KGU6 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG033350.