Basic Information
Locus ID:
gene:TRIDC5AG031850
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 398376823 | 398378877 | - | gene:TRIDC5AG031850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.89 | 42,927.03 Da | 46.40 | 87.73 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 212 | 311 | 3.7E-9 | IPR013187 |
| Pfam | PF00646 | F-box domain | 25 | 65 | 1.3E-7 | IPR001810 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 128 | 347 | 1.03E-6 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 27 | 73 | 2.62E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 20 | 73 | 8.4E-8 | - |
| SMART | SM00256 | fbox_2 | 25 | 65 | 5.0E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 114 | 317 | 1.5E-25 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23960.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_037434298.1 | putative F-box protein At3g23960 [Triticum dicoccoides] | 0 |
| Q9LIR1 | Putative F-box protein At3g23960 OS=Arabidopsis thaliana OX=3702 GN=At3g23960 PE=4 SV=1 | 0 | |
| TrEMBL | A0A8R7V9Z8 | F-box domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG031850.