Basic Information
Locus ID:
gene:TRIDC5AG031730
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 397060445 | 397064713 | + | gene:TRIDC5AG031730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 70,466.72 Da | 56.71 | 68.69 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 577 | 616 | 1.91862E-7 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 576 | 622 | 1.9E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 550 | 628 | 3.7E-10 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 577 | 617 | 9.376395 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 545 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| Coils | Coil | Coil | 364 | 405 | - | - |
| Coils | Coil | Coil | 286 | 321 | - | - |
| Coils | Coil | Coil | 413 | 461 | - | - |
| Coils | Coil | Coil | 498 | 525 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35330.2 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037434289.1 | MND1-interacting protein 1-like [Triticum dicoccoides] | 0 |
| Q8RX22 | MND1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453KQ55 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG031730.