Basic Information
Locus ID:
gene:TRIDC5AG031710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 397041879 | 397047332 | + | gene:TRIDC5AG031710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 36,912.96 Da | 42.22 | 72.59 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 14 | 298 | 7.4411E-50 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 94 | 130 | 0.0011 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 54 | 89 | 7.6E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 264 | 297 | 5.4E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 181 | 214 | 0.097 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 5 | 302 | 5.27E-68 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 9 | 323 | 4.8E-74 | IPR015943 |
| SMART | SM00320 | WD40_4 | 217 | 256 | 49.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 134 | 174 | 0.51 | IPR001680 |
| SMART | SM00320 | WD40_4 | 177 | 214 | 0.0022 | IPR001680 |
| SMART | SM00320 | WD40_4 | 259 | 298 | 1.5E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 5 | 47 | 27.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 92 | 130 | 1.8E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 50 | 89 | 2.6E-6 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 57 | 89 | 8.518333 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 98 | 139 | 8.570195 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 266 | 300 | 14.518635 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 141 | 183 | 8.67045 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 57 | 98 | 11.277069 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 266 | 300 | 11.998316 | - |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 117 | 131 | 6.6E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 285 | 299 | 6.6E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 76 | 90 | 6.6E-5 | IPR020472 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15610.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037434292.1 | serine-threonine kinase receptor-associated protein-like [Triticum dicoccoides] | 0 |
| Q54LT8 | Serine-threonine kinase receptor-associated protein OS=Dictyostelium discoideum OX=44689 GN=strap PE=3 SV=1 | 0 | |
| TrEMBL | A0A8R7QEW8 | Serine-threonine kinase receptor-associated protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG031710.