Basic Information
Locus ID:
gene:TRIDC5AG030480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 4 WD40 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 387128393 | 387133212 | + | gene:TRIDC5AG030480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 52,385.88 Da | 50.36 | 76.05 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 161 | 450 | 4.69389E-44 | - |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 195 | 252 | 1.3E-4 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 327 | 365 | 0.0024 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 276 | 311 | 9.7E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 415 | 450 | 1.5E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 158 | 453 | 1.71E-55 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 101 | 453 | 1.1E-114 | IPR015943 |
| SMART | SM00320 | WD40_4 | 411 | 450 | 1.6E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 188 | 227 | 0.025 | IPR001680 |
| SMART | SM00320 | WD40_4 | 368 | 408 | 420.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 230 | 268 | 2.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 323 | 365 | 0.002 | IPR001680 |
| SMART | SM00320 | WD40_4 | 272 | 311 | 3.5E-8 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 279 | 311 | 10.759232 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 195 | 236 | 9.906923 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 279 | 320 | 12.981398 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 418 | 451 | 13.282162 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 418 | 451 | 11.022865 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 437 | 451 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33260.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.2) | 0 |
| RefSeq | XP_037434196.1 | cell division cycle 20.2, cofactor of APC complex-like [Triticum dicoccoides] | 0 |
| Q9S7I8 | Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KFI3 | ANAPC4_WD40 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG030480.