Basic Information
Locus ID:
gene:TRIDC5AG029900
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 381162405 | 381165775 | - | gene:TRIDC5AG029900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 103,826.84 Da | 37.65 | 106.40 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 78 | 1.7E-5 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 108 | 128 | 0.39 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 680 | 893 | 2.0E-46 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 207 | 228 | 0.7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 270 | 1.87E-39 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 202 | 435 | 7.25E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 670 | 948 | 8.36E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 368 | 597 | 3.74E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 759 | 964 | 4.1E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 322 | 2.5E-71 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 606 | 1.6E-82 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 661 | 758 | 1.4E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 106 | 130 | 54.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 678 | 948 | 7.5E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 276 | 300 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 516 | 540 | 6.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 228 | 252 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 492 | 515 | 92.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 678 | 951 | 36.428276 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 803 | 815 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 516 | 529 | 7.8E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 495 | 508 | 7.8E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_037434151.1 | receptor-like protein kinase HSL1 [Triticum dicoccoides] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KF07 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG029900.