Basic Information
Locus ID:
gene:TRIDC5AG026530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 339453191 | 339456542 | + | gene:TRIDC5AG026530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.58 | 84,363.45 Da | 44.79 | 93.98 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 50 | 89 | 4.2E-9 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 126 | 139 | 0.85 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 496 | 795 | 5.6E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 495 | 798 | 5.4E-45 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 308 | 1.74E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 219 | 309 | 5.2E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 457 | 566 | 2.2E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 569 | 811 | 8.1E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 48 | 218 | 2.7E-41 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 172 | 196 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 218 | 241 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 5.8 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 490 | 800 | 24.909067 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 463 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 463 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 652 | 710 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67280.1 | receptor-like kinase. | 0 |
| RefSeq | XP_037433865.1 | probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Triticum dicoccoides] | 0 |
| Q94C77 | Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana OX=3702 GN=At4g34220 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KGP3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG026530.