Basic Information
Locus ID:
gene:TRIDC5AG026040
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PAS domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 333245315 | 333251902 | - | gene:TRIDC5AG026040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.05 | 100,031.68 Da | 44.13 | 78.07 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 581 | 894 | 5.65805E-180 | - |
| CDD | cd00130 | PAS | 404 | 504 | 3.60734E-12 | IPR000014 |
| CDD | cd00130 | PAS | 139 | 228 | 3.57936E-7 | IPR000014 |
| Pfam | PF00069 | Protein kinase domain | 586 | 870 | 3.5E-58 | IPR000719 |
| Pfam | PF13426 | PAS domain | 412 | 507 | 2.4E-20 | IPR000014 |
| Pfam | PF13426 | PAS domain | 136 | 229 | 1.3E-17 | IPR000014 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 568 | 891 | 1.16E-77 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 405 | 504 | 1.06E-24 | IPR035965 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 135 | 225 | 1.68E-22 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 667 | 886 | 4.8E-93 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 383 | 537 | 1.2E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 582 | 666 | 4.8E-93 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 126 | 293 | 3.1E-45 | - |
| SMART | SM00091 | pas_2 | 114 | 183 | 0.56 | IPR000014 |
| SMART | SM00091 | pas_2 | 391 | 460 | 0.71 | IPR000014 |
| SMART | SM00220 | serkin_6 | 583 | 870 | 2.5E-85 | IPR000719 |
| SMART | SM00086 | pac_2 | 189 | 231 | 1.7E-4 | IPR001610 |
| SMART | SM00086 | pac_2 | 466 | 508 | 1.6E-8 | IPR001610 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 139 | 230 | 3.8E-9 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 414 | 510 | 3.7E-11 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 389 | 462 | 10.875991 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 112 | 161 | 10.940372 | IPR000014 |
| ProSiteProfiles | PS50113 | PAC domain profile. | 186 | 240 | 11.677102 | IPR000700 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 583 | 870 | 44.187843 | IPR000719 |
| ProSiteProfiles | PS50113 | PAC domain profile. | 463 | 517 | 12.527623 | IPR000700 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 704 | 716 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 589 | 612 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 106 | - | - |
| Coils | Coil | Coil | 521 | 541 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G45780.1 | phototropin 1. Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376. | 0 |
| RefSeq | XP_044380719.1 | phototropin-1A-like isoform X3 [Triticum aestivum] | 0 |
| Q2QYY8 | Phototropin-1A OS=Oryza sativa subsp. japonica OX=39947 GN=PHOT1A PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6KDZ8 | LOV domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG026040.