Basic Information
Locus ID:
gene:TRIDC5AG025980
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 332827190 | 332833602 | + | gene:TRIDC5AG025980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 101,435.01 Da | 35.58 | 92.87 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 604 | 870 | 1.83637E-91 | - |
| Pfam | PF12819 | Malectin-like domain | 29 | 361 | 4.4E-84 | IPR024788 |
| Pfam | PF00069 | Protein kinase domain | 601 | 813 | 2.6E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 454 | 494 | 6.5E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 398 | 519 | 1.59E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 579 | 867 | 1.89E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 371 | 528 | 8.5E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 674 | 893 | 4.2E-58 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 187 | 364 | 2.0E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 574 | 673 | 2.5E-29 | - |
| SMART | SM00220 | serkin_6 | 598 | 873 | 5.1E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 598 | 873 | 37.983017 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 604 | 626 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 720 | 732 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37050.3 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037433838.1 | probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Triticum dicoccoides] | 0 |
| C0LGI2 | Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana OX=3702 GN=At1g67720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KGJ5 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG025980.