Basic Information
Locus ID:
gene:TRIDC5AG023620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Histone-binding protein RBBP4 or subunit C of CAF1 complex
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 309543924 | 309553370 | - | gene:TRIDC5AG023620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 21,249.80 Da | 36.02 | 85.13 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 77 | 110 | 0.0055 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 2 | 171 | 7.72E-27 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 179 | 4.3E-44 | IPR015943 |
| SMART | SM00320 | WD40_4 | 70 | 110 | 5.6E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 20 | 60 | 0.0017 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 77 | 119 | 11.912015 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1 | 17 | 9.572741 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 77 | 112 | 9.810144 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19540.1 | Transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037432534.1 | glutamate-rich WD repeat-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q9ZUN8 | Protein HEAT STRESS TOLERANT DWD 1 OS=Arabidopsis thaliana OX=3702 GN=HTD1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KFY0 | CAF1C_H4-bd domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG023620.