Basic Information
Locus ID:
gene:TRIDC5AG023470
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 308479871 | 308484575 | - | gene:TRIDC5AG023470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 51,418.56 Da | 45.25 | 81.97 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 105 | 181 | 2.4E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 205 | 242 | 0.041 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 290 | 311 | 0.17 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 105 | 462 | 2.5E-28 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 70 | 262 | 9.3E-17 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 277 | 465 | 1.8E-11 | IPR015943 |
| SMART | SM00320 | WD40_4 | 370 | 414 | 170.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 276 | 312 | 2.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 134 | 172 | 0.0067 | IPR001680 |
| SMART | SM00320 | WD40_4 | 201 | 242 | 0.15 | IPR001680 |
| SMART | SM00320 | WD40_4 | 93 | 127 | 120.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 280 | 315 | 9.372231 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 140 | 172 | 8.536777 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56900.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037433663.1 | aladin-like [Triticum dicoccoides] | 0 |
| Q8GWR1 | Aladin OS=Arabidopsis thaliana OX=3702 GN=AAAS PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7UI07 | ANAPC4_WD40 domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG023470.