Basic Information
Locus ID:
gene:TRIDC5AG023440
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK17
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 308380226 | 308382827 | - | gene:TRIDC5AG023440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 60,755.85 Da | 35.70 | 74.66 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 95 | 352 | 3.51433E-133 | - |
| Pfam | PF13499 | EF-hand domain pair | 401 | 461 | 1.5E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 470 | 533 | 4.4E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 95 | 353 | 1.3E-73 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 393 | 533 | 2.86E-47 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 361 | 8.5E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 96 | 180 | 9.0E-30 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 365 | 535 | 1.7E-57 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 181 | 364 | 3.5E-56 | - |
| SMART | SM00054 | efh_1 | 507 | 535 | 1.3E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 472 | 500 | 0.0025 | IPR002048 |
| SMART | SM00054 | efh_1 | 436 | 464 | 1.4E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 400 | 428 | 2.0E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 95 | 353 | 7.1E-96 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 95 | 353 | 48.060558 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 432 | 467 | 11.947029 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 468 | 503 | 14.457615 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 506 | 538 | 11.919133 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 396 | 431 | 15.545536 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 516 | 528 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 445 | 457 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 215 | 227 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 409 | 421 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 101 | 128 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 481 | 493 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 552 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12180.1 | calcium-dependent protein kinase 17. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037430961.1 | calcium-dependent protein kinase 25-like [Triticum dicoccoides] | 0 |
| Q2RAV0 | Calcium-dependent protein kinase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KDC3 | Calcium-dependent protein kinase 17 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG023440.