Basic Information
Locus ID:
gene:TRIDC5AG022110
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain of unknown function (DUF3420)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 290229998 | 290232860 | + | gene:TRIDC5AG022110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 51,679.36 Da | 43.55 | 90.85 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11900 | Domain of unknown function (DUF3420) | 218 | 246 | 5.3E-7 | IPR024228 |
| Pfam | PF00651 | BTB/POZ domain | 16 | 125 | 2.8E-10 | IPR000210 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 286 | 367 | 9.1E-12 | IPR020683 |
| SUPERFAMILY | SSF54695 | POZ domain | 8 | 209 | 7.32E-18 | IPR011333 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 297 | 381 | 1.9E-19 | IPR036770 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 212 | 8.5E-23 | IPR011333 |
| Gene3D | G3DSA:1.25.40.20 | - | 268 | 387 | 3.9E-21 | IPR036770 |
| SMART | SM00248 | ANK_2a | 337 | 366 | 9.1E-6 | IPR002110 |
| SMART | SM00225 | BTB_4 | 25 | 179 | 3.7E-18 | IPR000210 |
| SMART | SM00248 | ANK_2a | 302 | 332 | 0.0071 | IPR002110 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 25 | 126 | 15.659319 | IPR000210 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 337 | 367 | 11.028328 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 337 | 369 | 11.91483 | IPR002110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 493 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41370.1 | Ankyrin repeat family protein / BTB/POZ domain-containing protein. Encodes BOP2, a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abscission. BOP1/2 promotes floral meristem fate and determinacy in a pathway targetting APETALA1 and AGAMOUS-LIKE24. PUCHI, BOP1 and BOP2 are redundantly required for expression of LFY and AP1. | 0 |
| RefSeq | XP_037435366.1 | BTB/POZ domain and ankyrin repeat-containing protein NH5.2-like [Triticum dicoccoides] | 0 |
| Q2QXZ2 | BTB/POZ domain and ankyrin repeat-containing protein NH5.2 OS=Oryza sativa subsp. japonica OX=39947 GN=NH5.2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KGI4 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG022110.