Basic Information
Locus ID:
gene:TRIDC5AG021640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 281164116 | 281172110 | - | gene:TRIDC5AG021640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 123,162.10 Da | 57.09 | 51.51 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF49599 | TRAF domain-like | 84 | 138 | 1.37E-5 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 12 | 71 | 1.92E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 8 | 119 | 7.0E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 20 | 59 | 9.715714 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 37 | 46 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 668 | 702 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 716 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 536 | 615 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037435334.1 | altered inheritance of mitochondria protein 3-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6KE03 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG021640.