Basic Information
Locus ID:
gene:TRIDC5AG021130
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the TUB family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 269020773 | 269024186 | - | gene:TRIDC5AG021130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 48,904.17 Da | 52.05 | 70.87 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 52 | 105 | 5.1E-11 | IPR001810 |
| Pfam | PF01167 | Tub family | 116 | 434 | 8.2E-112 | IPR000007 |
| SUPERFAMILY | SSF54518 | Tubby C-terminal domain-like | 102 | 439 | 1.94E-97 | IPR025659 |
| SUPERFAMILY | SSF81383 | F-box domain | 44 | 97 | 1.7E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 48 | 101 | 2.8E-6 | - |
| Gene3D | G3DSA:3.20.90.10 | Tubby Protein; Chain A | 112 | 433 | 8.8E-95 | IPR025659 |
| ProSitePatterns | PS01200 | Tub family signature 1. | 358 | 371 | - | IPR018066 |
| ProSitePatterns | PS01201 | Tub family signature 2. | 424 | 439 | - | IPR018066 |
| PRINTS | PR01573 | Tubby superfamily signature | 340 | 357 | 2.9E-74 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 396 | 415 | 2.9E-74 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 185 | 209 | 2.9E-74 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 235 | 262 | 2.9E-74 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 417 | 439 | 2.9E-74 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 169 | 185 | 2.9E-74 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 358 | 374 | 2.9E-74 | IPR000007 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25280.1 | tubby like protein 10. Member of TLP family | 0 |
| RefSeq | XP_037435304.1 | tubby-like F-box protein 14 [Triticum dicoccoides] | 0 |
| Q2QXB2 | Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KFD0 | Tubby-like F-box protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG021130.