Basic Information
Locus ID:
gene:TRIDC5AG020600
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain of Unknown Function (DUF913)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 261486600 | 261500194 | - | gene:TRIDC5AG020600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 393,302.16 Da | 47.87 | 89.31 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 3192 | 3551 | 1.93791E-152 | IPR000569 |
| CDD | cd14327 | UBA_atUPL1_2_like | 1216 | 1253 | 6.74102E-14 | - |
| Pfam | PF14377 | Ubiquitin binding region | 2510 | 2542 | 2.0E-11 | IPR025527 |
| Pfam | PF14377 | Ubiquitin binding region | 2473 | 2499 | 1.8E-8 | IPR025527 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 3242 | 3552 | 8.9E-94 | IPR000569 |
| Pfam | PF06012 | Domain of Unknown Function (DUF908) | 30 | 333 | 7.1E-39 | IPR010309 |
| Pfam | PF14377 | Ubiquitin binding region | 2550 | 2581 | 1.4E-6 | IPR025527 |
| Pfam | PF06025 | Domain of Unknown Function (DUF913) | 396 | 719 | 2.1E-56 | IPR010314 |
| Pfam | PF00627 | UBA/TS-N domain | 1214 | 1250 | 6.3E-6 | IPR015940 |
| SUPERFAMILY | SSF46934 | UBA-like | 1196 | 1263 | 4.76E-15 | IPR009060 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 3182 | 3545 | 4.97E-124 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 330 | 719 | 1.61E-7 | IPR016024 |
| SUPERFAMILY | SSF48371 | ARM repeat | 26 | 429 | 1.44E-9 | IPR016024 |
| Gene3D | G3DSA:1.10.8.10 | - | 1211 | 1283 | 1.4E-17 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 248 | 491 | 1.7E-6 | IPR011989 |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 3313 | 3397 | 1.9E-96 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 3166 | 3430 | 1.9E-96 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 3434 | 3553 | 1.2E-48 | - |
| Gene3D | G3DSA:6.10.250.1630 | - | 2510 | 2545 | 5.0E-6 | - |
| SMART | SM00119 | hect_3 | 3210 | 3553 | 2.2E-164 | IPR000569 |
| SMART | SM00165 | uba_6 | 1214 | 1252 | 4.8E-9 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 1212 | 1253 | 14.956604 | IPR015940 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 3212 | 3553 | 110.324394 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2027 | 2050 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 919 | 953 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 3093 | 3124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2304 | 2323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 845 | 864 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2373 | 2388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2330 | 2479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 939 | 953 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2426 | 2477 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 3096 | 3120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2027 | 2125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 921 | 938 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2051 | 2085 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2845 | 2886 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2307 | 2323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1706 | 1721 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1704 | 1724 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2100 | 2125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2614 | 2641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2398 | 2415 | - | - |
| Coils | Coil | Coil | 2821 | 2848 | - | - |
| Coils | Coil | Coil | 2531 | 2551 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55860.1 | ubiquitin-protein ligase 1. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_037435265.1 | E3 ubiquitin-protein ligase UPL1-like [Triticum dicoccoides] | 0 |
| Q8GY23 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana OX=3702 GN=UPL1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B6KDR3 | HECT-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG020600.