Basic Information
Locus ID:
gene:TRIDC5AG016950
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CDPK9
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 188037640 | 188042398 | + | gene:TRIDC5AG016950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 57,321.63 Da | 36.63 | 85.52 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 43 | 301 | 9.26702E-140 | - |
| CDD | cd00051 | EFh | 422 | 481 | 8.65145E-19 | IPR002048 |
| CDD | cd00051 | EFh | 350 | 409 | 5.53448E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 350 | 410 | 5.7E-12 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 44 | 302 | 2.9E-72 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 420 | 481 | 3.0E-12 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 342 | 481 | 2.09E-46 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 41 | 312 | 3.37E-85 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 130 | 313 | 5.9E-55 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 314 | 484 | 1.5E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 46 | 129 | 3.6E-28 | - |
| SMART | SM00220 | serkin_6 | 44 | 302 | 4.1E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 385 | 413 | 0.11 | IPR002048 |
| SMART | SM00054 | efh_1 | 349 | 377 | 5.1E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 455 | 483 | 1.5E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 421 | 449 | 0.0071 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 44 | 302 | 47.283188 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 417 | 452 | 14.84815 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 345 | 380 | 15.685013 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 381 | 416 | 10.050141 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 455 | 486 | 11.835447 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 164 | 176 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 358 | 370 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 430 | 442 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 394 | 406 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 464 | 476 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 50 | 73 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G09570.1 | calcium-dependent protein kinase 4. Encodes a member of Calcium Dependent Protein Kinase (CDPK) gene family.Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4. | 0 |
| RefSeq | XP_037433486.1 | calcium-dependent protein kinase 28 [Triticum dicoccoides] | 0 |
| Q2QX45 | Calcium-dependent protein kinase 28 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK28 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6KDD0 | Calcium-dependent protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG016950.