Basic Information
Locus ID:
gene:TRIDC5AG014820
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 134574222 | 134576657 | - | gene:TRIDC5AG014820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 20,221.49 Da | 78.30 | 55.50 | -1.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 86 | 129 | 3.3E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 86 | 135 | 1.14E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 78 | 146 | 3.9E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 87 | 128 | 2.0E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 87 | 129 | 12.651561 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 169 | - | - |
| Coils | Coil | Coil | 32 | 59 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_040244958.1 | probable E3 ubiquitin-protein ligase plr-1 [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | A0A3B6KEC4 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG014820.