Basic Information
Locus ID:
gene:TRIDC5AG013160
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 113793647 | 113800878 | + | gene:TRIDC5AG013160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.20 | 83,224.01 Da | 54.47 | 71.50 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 119 | 220 | 6.75848E-16 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 479 | 725 | 2.11037E-129 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 474 | 725 | 2.7E-67 | IPR001245 |
| Pfam | PF00989 | PAS fold | 111 | 218 | 2.3E-15 | IPR013767 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 108 | 217 | 2.44E-21 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 441 | 724 | 7.28E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 120 | 225 | 1.6E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 466 | 550 | 1.2E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 551 | 753 | 2.2E-63 | - |
| SMART | SM00220 | serkin_6 | 473 | 733 | 3.3E-54 | IPR000719 |
| SMART | SM00091 | pas_2 | 110 | 177 | 3.1E-11 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 109 | 220 | 5.7E-15 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 108 | 179 | 19.985958 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 733 | 43.198463 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 592 | 604 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 586 | 604 | 5.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 652 | 674 | 5.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 547 | 560 | 5.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 696 | 718 | 5.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 633 | 643 | 5.2E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 65 | - | - |
| Coils | Coil | Coil | 718 | 738 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_037432968.1 | dual specificity protein kinase shkD-like [Triticum dicoccoides] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KDX3 | PAS domain-containing protein tyrosine kinase family protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG013160.