Basic Information
Locus ID:
gene:TRIDC5AG012750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 108849223 | 108860764 | + | gene:TRIDC5AG012750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.91 | 104,252.97 Da | 46.11 | 90.17 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 618 | 886 | 1.21539E-90 | - |
| Pfam | PF12819 | Malectin-like domain | 36 | 385 | 2.5E-92 | IPR024788 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 614 | 884 | 1.1E-49 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 443 | 500 | 2.5E-11 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 597 | 892 | 3.37E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 414 | 508 | 6.38E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 586 | 687 | 6.4E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 688 | 905 | 2.1E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 399 | 519 | 1.6E-26 | IPR032675 |
| SMART | SM00220 | serkin_6 | 612 | 907 | 4.1E-29 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 465 | 487 | 7.095899 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 612 | 888 | 37.516594 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 734 | 746 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 618 | 640 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 487 | 500 | 7.1E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 466 | 479 | 7.1E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29990.1 | Leucine-rich repeat transmembrane protein kinase protein. | 0 |
| RefSeq | XP_048528633.1 | putative leucine-rich repeat receptor-like protein kinase At2g19210 [Triticum urartu] | 0 |
| O65924 | Putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Arabidopsis thaliana OX=3702 GN=At2g19210 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KDT3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG012750.