Basic Information
Locus ID:
gene:TRIDC5AG010980
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 83111420 | 83114177 | - | gene:TRIDC5AG010980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 30,148.81 Da | 76.93 | 70.62 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 221 | 263 | 5.3E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 211 | 267 | 8.32E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 221 | 269 | 1.1E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 222 | 262 | 3.1E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 222 | 263 | 12.445019 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 77 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G17905.1 | RING/U-box superfamily protein. Putative RING-H2 finger protein ATL4H. | 0 |
| RefSeq | XP_037432644.1 | probable E3 ubiquitin-protein ligase RHY1A [Triticum dicoccoides] | 0 |
| P0C041 | Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2 | 0 | |
| TrEMBL | A0A8R7UFV2 | RING-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG010980.