halophFGD

Basic Information

Locus ID: gene:TRIDC5AG010530

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
5A	76832830	76834270	-	gene:TRIDC5AG010530

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.55	43,869.29 Da	54.07	92.25	-0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	35	97	1.83E-7	IPR036047
SUPERFAMILY	SSF52047	RNI-like	133	357	3.06E-6	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	31	311	5.2E-7	IPR032675
MobiDBLite	mobidb-lite	consensus disorder prediction	1	35	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G78760.1	F-box/RNI-like superfamily protein.
RefSeq	XP_037432605.1	putative F-box/FBD/LRR-repeat protein At5g22670 [Triticum dicoccoides]
Swiss-Prot	Q9ZV94	Putative F-box/FBD/LRR-repeat protein At1g78760 OS=Arabidopsis thaliana OX=3702 GN=At1g78760 PE=4 SV=1
TrEMBL	A0A3B6KDB1	FBD domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC5AG010530.