Basic Information
Locus ID:
gene:TRIDC5AG007760
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 46578680 | 46585489 | - | gene:TRIDC5AG007760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 87,569.76 Da | 36.34 | 86.31 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 284 | 314 | 0.0023 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 14 | 420 | 9.16E-33 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 464 | 722 | 8.7E-20 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 151 | 439 | 4.0E-24 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 9 | 136 | 3.7E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 459 | 738 | 1.4E-18 | IPR015943 |
| SMART | SM00320 | WD40_4 | 37 | 86 | 0.053 | IPR001680 |
| SMART | SM00320 | WD40_4 | 573 | 614 | 21.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 207 | 247 | 0.026 | IPR001680 |
| SMART | SM00320 | WD40_4 | 476 | 517 | 0.91 | IPR001680 |
| SMART | SM00320 | WD40_4 | 276 | 315 | 0.0012 | IPR001680 |
| SMART | SM00320 | WD40_4 | 534 | 570 | 2.4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 283 | 320 | 9.731054 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 283 | 324 | 12.446706 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 215 | 246 | 9.238559 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G18900.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037432323.1 | WD repeat-containing protein 75-like [Triticum dicoccoides] | 0 |
| O13878 | U3 small nucleolar RNA-associated protein 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp17 PE=3 SV=3 | 0 | |
| TrEMBL | A0A8R7QAG5 | WD_REPEATS_REGION domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG007760.