Basic Information
Locus ID:
gene:TRIDC5AG007350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 44180802 | 44183174 | - | gene:TRIDC5AG007350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 37,596.32 Da | 41.65 | 93.22 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 7 | 132 | 1.20103E-29 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 158 | 263 | 5.74393E-47 | - |
| Pfam | PF00651 | BTB/POZ domain | 160 | 265 | 1.1E-27 | IPR000210 |
| Pfam | PF00917 | MATH domain | 23 | 128 | 1.8E-4 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 150 | 265 | 1.18E-34 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 5 | 136 | 3.6E-33 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 5 | 136 | 4.0E-30 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 144 | 261 | 4.0E-38 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 266 | 336 | 1.8E-17 | - |
| SMART | SM00225 | BTB_4 | 169 | 266 | 1.7E-27 | IPR000210 |
| SMART | SM00061 | math_3 | 10 | 115 | 4.1E-7 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 169 | 236 | 18.265251 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 5 | 132 | 20.467651 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_037430843.1 | BTB/POZ and MATH domain-containing protein 3-like [Triticum dicoccoides] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KCH6 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG007350.