Basic Information
Locus ID:
gene:TRIDC5AG006520
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 39942317 | 39946788 | + | gene:TRIDC5AG006520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 69,982.82 Da | 50.75 | 91.91 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 19 | 121 | 2.73193E-46 | - |
| Pfam | PF00651 | BTB/POZ domain | 27 | 113 | 2.7E-9 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 211 | 469 | 2.4E-90 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 113 | 3.85E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 130 | 2.3E-12 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 124 | 6.6E-5 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 96 | 12.102015 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 211 | 493 | 90.613602 | IPR027356 |
| Coils | Coil | Coil | 540 | 574 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_020162601.1 | BTB/POZ domain-containing protein At1g30440 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6KA48 | BTB/POZ domain-containing protein At1g30440 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG006520.