Basic Information
Locus ID:
gene:TRIDC5AG006280
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 38641225 | 38642697 | - | gene:TRIDC5AG006280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 40,358.00 Da | 39.84 | 86.78 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 39 | 161 | 5.5494E-20 | IPR002083 |
| Pfam | PF00917 | MATH domain | 42 | 163 | 1.7E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 184 | 295 | 2.3E-25 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 168 | 294 | 3.41E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 34 | 169 | 2.94E-26 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 34 | 166 | 7.8E-25 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 295 | 363 | 2.5E-22 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 167 | 290 | 1.4E-34 | IPR011333 |
| SMART | SM00061 | math_3 | 39 | 144 | 0.0016 | IPR002083 |
| SMART | SM00225 | BTB_4 | 191 | 296 | 3.3E-23 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 34 | 161 | 18.907911 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 191 | 258 | 16.403872 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037432202.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KB87 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG006280.