Basic Information
Locus ID:
gene:TRIDC5AG005580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 34299992 | 34301842 | + | gene:TRIDC5AG005580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 40,015.31 Da | 44.28 | 91.01 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 169 | 279 | 6.41662E-49 | - |
| CDD | cd00121 | MATH | 19 | 145 | 2.61094E-33 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 172 | 281 | 2.2E-25 | IPR000210 |
| Pfam | PF00917 | MATH domain | 36 | 144 | 4.6E-6 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 161 | 282 | 1.1E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 17 | 149 | 1.8E-35 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 157 | 277 | 3.9E-36 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 17 | 148 | 5.9E-34 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 282 | 348 | 1.4E-15 | - |
| SMART | SM00061 | math_3 | 22 | 127 | 1.8E-4 | IPR002083 |
| SMART | SM00225 | BTB_4 | 181 | 282 | 1.2E-24 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 17 | 144 | 21.669416 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 181 | 248 | 17.293198 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037430812.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KB38 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG005580.