Basic Information
Locus ID:
gene:TRIDC5AG004920
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 29932207 | 29933951 | - | gene:TRIDC5AG004920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 15,014.68 Da | 28.28 | 82.41 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 75 | 111 | 0.0025 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 6 | 135 | 1.14E-16 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 7 | 139 | 5.4E-16 | IPR015943 |
| SMART | SM00320 | WD40_4 | 64 | 111 | 9.2E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 24 | 61 | 3.2 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 92 | 113 | 9.672996 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 48 | 62 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 98 | 112 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65030.1 | Transducin/WD40 repeat-like superfamily protein. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase | 0 |
| RefSeq | XP_037432141.1 | p21-activated protein kinase-interacting protein 1-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A8R7UE14 | WD_REPEATS_REGION domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG004920.