Basic Information
Locus ID:
gene:TRIDC5AG004090
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 23468768 | 23471873 | + | gene:TRIDC5AG004090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 102,863.66 Da | 60.40 | 80.13 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 74 | 114 | 4.4E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 73 | 121 | 1.03E-11 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 507 | 549 | 5.36E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 57 | 111 | 9.8E-8 | - |
| SMART | SM00256 | fbox_2 | 75 | 115 | 1.3E-7 | IPR001810 |
| SMART | SM00256 | fbox_2 | 502 | 541 | 1.6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 183 | 436 | 1.9E-13 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 69 | 114 | 10.292301 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 65 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49610.1 | F-box family protein. | 0 |
| RefSeq | XP_037432276.1 | uncharacterized protein LOC119299092 [Triticum dicoccoides] | 0 |
| Q9FGY4 | F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6MK92 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG004090.