Basic Information
Locus ID:
gene:TRIDC5AG001050
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 4204512 | 4212744 | - | gene:TRIDC5AG001050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 100,491.91 Da | 38.31 | 98.70 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 343 | 569 | 1.9E-38 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 39 | 301 | 1.3E-47 | IPR000719 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 326 | 593 | 6.38E-53 | IPR027417 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 320 | 1.27E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 662 | 884 | 7.31E-32 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 494 | 578 | 1.4E-8 | IPR042197 |
| Gene3D | G3DSA:1.10.10.10 | - | 579 | 673 | 1.1E-5 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 688 | 889 | 1.2E-36 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 327 | 485 | 1.3E-28 | IPR027417 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 17 | 108 | 3.0E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 325 | 1.6E-49 | - |
| SMART | SM00220 | serkin_6 | 38 | 313 | 2.5E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 314 | 37.530731 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 169 | 181 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 66 | - | IPR017441 |
| PRINTS | PR00364 | Disease resistance protein signature | 530 | 544 | 2.5E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 361 | 376 | 2.5E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 432 | 446 | 2.5E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 825 | 841 | 2.5E-16 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11410.2 | - | 0 |
| RefSeq | XP_037431942.1 | putative disease resistance RPP13-like protein 1 [Triticum dicoccoides] | 0 |
| Q7XA40 | Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8R7UAZ3 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG001050.