Basic Information
Locus ID:
gene:TRIDC5AG000540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 2074911 | 2077785 | + | gene:TRIDC5AG000540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 101,343.55 Da | 44.94 | 81.12 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 599 | 810 | 3.2E-45 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 415 | 448 | 1.7E-4 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 575 | 893 | 3.37E-69 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 102 | 191 | 2.75E-13 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 569 | 670 | 1.7E-29 | - |
| Gene3D | G3DSA:2.90.10.30 | - | 49 | 187 | 1.9E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 671 | 907 | 1.6E-54 | - |
| SMART | SM00220 | serkin_6 | 594 | 894 | 2.2E-24 | IPR000719 |
| SMART | SM00108 | blect_4 | 45 | 175 | 1.5E-4 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 594 | 894 | 34.788734 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 372 | 468 | 7.448375 | IPR003609 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 600 | 622 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 719 | 731 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 808 | 823 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 572 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 798 | 827 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 934 | 957 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35370.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037431899.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Triticum dicoccoides] | 0 |
| O65238 | G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana OX=3702 GN=At5g35370 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6U6W6 | Non-specific serine/threonine protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG000540.