Basic Information
Locus ID:
gene:TRIDC4BG062430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
MDM2/MDM4 family protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 664870647 | 664874371 | + | gene:TRIDC4BG062430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 41,371.37 Da | 52.38 | 80.74 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 187 | 236 | 7.0E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 187 | 240 | 2.65E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 184 | 248 | 3.7E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 188 | 236 | 0.0029 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 188 | 236 | 11.766381 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03450.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037428414.1 | uncharacterized protein LOC119294305 isoform X2 [Triticum dicoccoides] | 0 |
| A0A1L8GLK3 | E3 ubiquitin-protein ligase rfwd3.L OS=Xenopus laevis OX=8355 GN=rfwd3.L PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6J0C5 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG062430.