Basic Information
Locus ID:
gene:TRIDC4BG060140
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 654164957 | 654168937 | - | gene:TRIDC4BG060140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 68,557.91 Da | 50.45 | 71.02 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 139 | 170 | 1.1E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 426 | 450 | 0.025 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 240 | 274 | 1.0E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 280 | 317 | 2.3E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 139 | 607 | 3.3E-54 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 377 | 454 | 1.6E-6 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 125 | 376 | 1.6E-44 | IPR015943 |
| SMART | SM00320 | WD40_4 | 237 | 275 | 1.2E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 319 | 358 | 2.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 127 | 171 | 4.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 373 | 409 | 10.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 569 | 608 | 42.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 278 | 317 | 3.4E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 410 | 450 | 0.14 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 139 | 180 | 15.621435 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 244 | 284 | 10.942887 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 139 | 172 | 12.551949 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 284 | 319 | 10.442869 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 284 | 319 | 12.546961 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 244 | 276 | 9.124694 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 429 | 450 | 9.672996 | IPR001680 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 158 | 172 | 8.3E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 304 | 318 | 8.3E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 262 | 276 | 8.3E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 221 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24320.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037426857.1 | kinesin-like protein KIF21B [Triticum dicoccoides] | 0 |
| Q498F0 | WD repeat-containing protein 44 OS=Xenopus laevis OX=8355 GN=wdr44 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6IZ57 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG060140.