Basic Information
Locus ID:
gene:TRIDC4BG058880
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 647851961 | 647855621 | + | gene:TRIDC4BG058880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 120,481.47 Da | 41.57 | 107.45 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 2.1E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 153 | 212 | 3.7E-8 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 419 | 453 | 9.5E-8 | IPR025875 |
| Pfam | PF00069 | Protein kinase domain | 834 | 1093 | 8.5E-39 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 310 | 2.55E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 812 | 1085 | 6.47E-64 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 298 | 508 | 1.7E-41 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 493 | 747 | 1.02E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 225 | 455 | 7.8E-58 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 224 | 2.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 793 | 913 | 2.7E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 458 | 760 | 1.1E-83 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 914 | 1106 | 1.6E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 150 | 2.2E-30 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 199 | 223 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 515 | 539 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 319 | 343 | 100.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 832 | 1098 | 1.5E-23 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 127 | 151 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 439 | 461 | 60.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 708 | 732 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 563 | 587 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 636 | 660 | 32.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 832 | 1098 | 34.251644 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 963 | 975 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 838 | 861 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 178 | 191 | 9.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 439 | 452 | 9.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47110.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037426803.1 | receptor kinase-like protein Xa21 [Triticum dicoccoides] | 0 |
| Q2R2D5 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IX83 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG058880.