Basic Information
Locus ID:
gene:TRIDC4BG058660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
BEST Arabidopsis thaliana protein match is Protein of
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 646739181 | 646741356 | - | gene:TRIDC4BG058660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 57,071.97 Da | 38.80 | 88.83 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 445 | 512 | 7.10955E-12 | - |
| Pfam | PF05056 | Protein of unknown function (DUF674) | 3 | 335 | 1.7E-56 | IPR007750 |
| Pfam | PF05056 | Protein of unknown function (DUF674) | 370 | 442 | 6.1E-8 | IPR007750 |
| Pfam | PF00240 | Ubiquitin family | 447 | 515 | 6.2E-8 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 441 | 516 | 8.29E-12 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 434 | 519 | 9.2E-14 | - |
| SMART | SM00213 | ubq_7 | 443 | 515 | 1.5E-5 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 443 | 519 | 12.247872 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09120.1 | Protein of unknown function (DUF674). | 0 |
| RefSeq | XP_037426788.1 | uncharacterized protein LOC119292061 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6IYV5 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG058660.