Basic Information
Locus ID:
gene:TRIDC4BG055520
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 626560550 | 626563278 | - | gene:TRIDC4BG055520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 70,043.46 Da | 45.51 | 110.95 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 400 | 423 | 0.32 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 375 | 397 | 0.21 | IPR001611 |
| Pfam | PF00646 | F-box domain | 22 | 53 | 0.0011 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 311 | 574 | 2.16E-29 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 56 | 5.1E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 65 | 299 | 2.63E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 62 | 476 | 6.5E-52 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 479 | 590 | 9.4E-6 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 426 | 449 | 520.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 375 | 400 | 9.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 401 | 425 | 100.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 478 | 503 | 140.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 451 | 475 | 250.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 504 | 529 | 270.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 323 | 348 | 0.011 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 105 | 130 | 77.0 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 612 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 612 | 630 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17020.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_037426620.1 | F-box/LRR-repeat protein 10-like [Triticum dicoccoides] | 0 |
| Q9SDA8 | F-box/LRR-repeat protein 10 OS=Arabidopsis thaliana OX=3702 GN=FBL10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6IWK8 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG055520.