Basic Information
Locus ID:
gene:TRIDC4BG054760
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 622481405 | 622488719 | - | gene:TRIDC4BG054760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 60,809.64 Da | 41.76 | 69.36 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16106 | Ubl_Dsk2p_like | 73 | 144 | 3.80084E-32 | - |
| CDD | cd14399 | UBA_PLICs | 538 | 577 | 8.43356E-18 | - |
| Pfam | PF00627 | UBA/TS-N domain | 539 | 575 | 8.5E-11 | IPR015940 |
| Pfam | PF00240 | Ubiquitin family | 76 | 142 | 5.1E-19 | IPR000626 |
| SUPERFAMILY | SSF46934 | UBA-like | 535 | 577 | 8.59E-15 | IPR009060 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 68 | 150 | 1.31E-21 | IPR029071 |
| Gene3D | G3DSA:1.10.260.100 | - | 232 | 294 | 4.5E-11 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 70 | 154 | 5.6E-20 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 525 | 580 | 1.2E-22 | - |
| SMART | SM00165 | uba_6 | 539 | 577 | 4.8E-7 | IPR015940 |
| SMART | SM00727 | CBM | 242 | 281 | 3.2E-9 | IPR006636 |
| SMART | SM00727 | CBM | 188 | 229 | 0.3 | IPR006636 |
| SMART | SM00727 | CBM | 395 | 437 | 2.1 | IPR006636 |
| SMART | SM00213 | ubq_7 | 73 | 144 | 2.8E-18 | IPR000626 |
| SMART | SM00727 | CBM | 441 | 476 | 1.7E-4 | IPR006636 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 73 | 142 | 19.564405 | IPR000626 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 534 | 578 | 13.293904 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 65 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17190.1 | ubiquitin family protein. | 0 |
| RefSeq | XP_020164895.2 | ubiquitin domain-containing protein DSK2a isoform X1 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9SII9 | Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana OX=3702 GN=DSK2A PE=1 SV=2 | 0 | |
| TrEMBL | A0A453J369 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG054760.