Basic Information
Locus ID:
gene:TRIDC4BG053450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 612155765 | 612156975 | - | gene:TRIDC4BG053450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 30,953.98 Da | 67.78 | 74.98 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 131 | 174 | 7.46576E-17 | - |
| Pfam | PF13639 | Ring finger domain | 131 | 174 | 1.9E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 131 | 183 | 6.31E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 106 | 179 | 3.7E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 132 | 173 | 4.4E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 132 | 174 | 12.622055 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 243 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 243 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04360.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037426498.1 | RING-H2 finger protein ATL1-like [Triticum dicoccoides] | 0 |
| P93823 | RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6IW45 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG053450.