Basic Information
Locus ID:
gene:TRIDC4BG052930
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 607987767 | 607990143 | + | gene:TRIDC4BG052930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 85,453.53 Da | 36.08 | 107.50 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 288 | 309 | 0.12 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 39 | 99 | 7.6E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 434 | 491 | 5.4E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 600 | 755 | 1.2E-27 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 236 | 518 | 5.89E-62 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 6 | 262 | 8.84E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 570 | 757 | 7.62E-44 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 232 | 537 | 2.5E-84 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 577 | 778 | 1.1E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 231 | 1.2E-57 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 407 | 431 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 286 | 310 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 134 | 158 | 380.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 596 | 789 | 1.2E-8 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 334 | 358 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 86 | 110 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 207 | 230 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 38 | 62 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 455 | 479 | 87.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 596 | 792 | 24.371975 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 602 | 628 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 726 | 738 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037426476.1 | receptor kinase-like protein Xa21 [Triticum dicoccoides] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IYC1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG052930.