Basic Information
Locus ID:
gene:TRIDC4BG052200
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 600387956 | 600391464 | - | gene:TRIDC4BG052200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 41,963.94 Da | 41.59 | 72.70 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02663 | Peptidase_C19G | 24 | 360 | 0.0 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 23 | 359 | 1.4E-61 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 21 | 360 | 5.3E-92 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 3 | 361 | 4.0E-109 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 23 | 362 | 61.489841 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 293 | 311 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 24 | 39 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 162 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39910.1 | ubiquitin-specific protease 3. Encodes a nuclear ubiquitin-specific protease. | 0 |
| RefSeq | XP_037426428.1 | ubiquitin carboxyl-terminal hydrolase 3-like [Triticum dicoccoides] | 0 |
| O24454 | Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana OX=3702 GN=UBP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453IYM0 | USP domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG052200.